RNAseq

Quality check from Kallisto output

This information is coupled with the multiQC report generated by the pipeline

Protocol

n_targets

n_processed

n_pseudoaligned

n_unique

p_pseudoaligned

p_unique

Protocol + Condition

n_targets

n_processed

n_pseudoaligned

n_unique

p_pseudoaligned

p_unique

Differental Expression : Treated vs Untreated

Analyse

Result :

  • DEGs number : 1931 (padj < 0.05)
  • Up-regulated in Treated condition : 1055
  • Down-regulated in Treated condition : 876
  • Positive logFC = up-regulated in Treated condition / down-regulated in Untreated condition
  • Negative logFC = up-regulated in Untreated condition / down-regulated in Treated condition

Dataset

Liste

Outlier

Heatmap

PCA

Expression

Volcano

Top20

TopHeatmap

MDplot